BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028E07LP1|AL428919
(906 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1373 1771 0.0
3x_Contig2 724 0.0
>3x_Contig1373
Length = 6197
Score = 1771 bits (891), Expect = 0.0
Identities = 902/907 (99%), Gaps = 1/907 (0%)
Strand = Plus / Plus
Query: 1 atcttgagtgtacttgcattttacaacacggtggatactaccatacagagcttcgaattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1277 atcttgagtgtacttgcattttacaacacggtggatactaccatacagagcttcgaattg 1336
Query: 61 ttggatgacctttatccgttattgttgagggctatccctctttctcagaaagttccagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1337 ttggatgacctttatccgttattgttgagggctatccctctttctcagaaagttccagga 1396
Query: 121 cttcaggacacgctattgcaaatagccctattatatgcaaaactaaataaatgaggttgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1397 cttcaggacacgctattgcaaatagccctattatatgcaaaactaaataaatgaggttgt 1456
Query: 181 tttgtaaacgtttgattatataactatagaataattcattaagaggttattagttcttcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1457 tttgtaaacgtttgattatataactatagaataattcattaagaggttattagttcttcc 1516
Query: 241 actctagaagagatattaggtcttgtgattcacagctcatgttaaagaaggaatgatgcm 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1517 actctagaagagatattaggtcttgtgattcacagctcatgttaaagaaggaatgatgca 1576
Query: 301 agagttcttcggtagatgctctgtattttacatcaacgcataagcmaacgcttaagaaac 360
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1577 agagttcttcggtagatgctctgtattttacatcaacgcataagcaaacgcttaagaaac 1636
Query: 361 gctttatttcaagagatagatattctggatgttttagcttaggtgtaccatttgttgcma 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1637 gctttatttcaagagatagatattctggatgttttagcttaggtgtaccatttgttgcaa 1696
Query: 421 tcaaatataaggctttcaatggttcctcattcaaatatggtggttcactttcaagcattt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1697 tcaaatataaggctttcaatggttcctcattcaaatatggtggttcactttcaagcattt 1756
Query: 481 caattgtcataatacctaaggaccaaacgtcaaccttttcatcatactctctttgcttga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1757 caattgtcataatacctaaggaccaaacgtcaaccttttcatcatactctctttgcttga 1816
Query: 541 caacttcaggggccatccagtaaggagttcctaccatagtagctcttttacttctcttat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1817 caacttcaggggccatccagtaaggagttcctaccatagtagctcttttacttctcttat 1876
Query: 601 cggtcaacttagcacagaacccaaagtcagtgatcttaacccgtcctctggtatcaagta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1877 cggtcaacttagcacagaacccaaagtcagtgatcttaacccgtcctctggtatcaagta 1936
Query: 661 aaacgttatcggatttgatatctctgtgaatgatgtgcttgtcatgcaaaaatttcaacc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1937 aaacgttatcggatttgatatctctgtgaatgatgtgcttgtcatgcaaaaatttcaacc 1996
Query: 721 cttggcaagtttcgcggacaatatatgcratttgtggctcggtcaaaggtgattgaccac 780
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1997 cttggcaagtttcgcggacaatatatgcaatttgtggctcggtcaaaggtgattgaccac 2056
Query: 781 tgctgccagttgggctgttttctattatgtctgtcagggaa-ctccttccatgtattcca 839
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 2057 tgctgccagttgggctgttttctattatgtctgtcagggaacctccttccatgtattcca 2116
Query: 840 taaccacccacaaatcatcttcagtctttagatatgcctctaagaaattgacaatgttat 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2117 taaccacccacaaatcatcttcagtctttagatatgcctctaagaaattgacaatgttat 2176
Query: 900 tgtgttt 906
|||||||
Sbjct: 2177 tgtgttt 2183
>3x_Contig2
Length = 877
Score = 724 bits (364), Expect = 0.0
Identities = 424/446 (95%)
Strand = Plus / Plus
Query: 103 tctcagaaagttccaggacttcaggacacgctattgcaaatagccctattatatgcaaaa 162
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tctcagtaagttccaggacttcaggacacgctattgcaaatagccctattatatgcaaaa 60
Query: 163 ctaaataaatgaggttgttttgtaaacgtttgattatataactatagaataattcattaa 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctaaataaatgaggttgttttgtaaacgtttgattatataactatagaataattcattaa 120
Query: 223 gaggttattagttcttccactctagaagagatattaggtcttgtgattcacagctcatgt 282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaggttattagttcttccactctagaagagatattaggtcttgtgattcacagctcatgt 180
Query: 283 taaagaaggaatgatgcmagagttcttcggtagatgctctgtattttacatcaacgcata 342
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 taaagaaggaatgatgcaagagttcttcggtagatgctctgtattttacatcaacgcata 240
Query: 343 agcmaacgcttaagaaacgctttatttcaagagatagatattctggatgttttagcttag 402
||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 241 agcaaacgcttaagaaacgctttatttcaagagatagatattctggattttttatcttat 300
Query: 403 gtgtaccatttgttgcmatcaaatataaggctttcaatggttcctcattcaaatatggtg 462
| |||||||| |||| ||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 301 ttttaccattttttgcaatcaaatataaccctttcaatccttcctcattcaaatatggtg 360
Query: 463 gttcactttcaagcatttcaattgtcataatacctaaggaccaaacgtcaaccttttcat 522
||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||
Sbjct: 361 gttcactttcaagcatttcaattttcataatacctaatttccaaacttcaaccttttcat 420
Query: 523 catactctctttgcttgacaacttca 548
|||||||||||| || |||||||||
Sbjct: 421 catactctcttttctatacaacttca 446
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6266
Number of Sequences: 1807
Number of extensions: 6266
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 2
length of query: 906
length of database: 10,358,551
effective HSP length: 16
effective length of query: 890
effective length of database: 10,329,639
effective search space: 9193378710
effective search space used: 9193378710
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)